Tiled RT-PCR of SARS-CoV-2 from wastewater. - SRA

SRX27000212: Tiled RT-PCR of SARS-CoV-2 from wastewater.
1 ILLUMINA (Illumina NovaSeq 6000) run: 2.1M spots, 1G bases, 341.1Mb downloads

External Id: ww019196

Design: Total nucleic acid from Ceres Nanotrap concentrate of wastewater influent treated with TurboDNase, concentrated, reverse transcribed with LunaScript, amplified with ARTIC v5.3.2 primers using NEB Q5, converted into Illumina-compatible libraries using NEB Ultra II DNA kit, and sequenced on an Illumina system 250PE or 300PE.

Submitted by: Verily Life Sciences LLC (verily_ww_nwss)

Study: SARS-CoV-2 wastewater surveillance (Verily Life Sciences/NWSS)

PRJNA1027353 • SRP473785 • All experiments • All runs

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Raw sequencing data targeting SARS-CoV-2 in wastewater samples. These data were generated from wastewater samples tested by Verily Life Sciences for monitoring SARS-CoV-2 lineages in wastewater for CDC NWSS.

Sample: SARS-CoV-2: wastewater surveillance sample from wastewater metagenome

SAMN45210868 • SRS23465368 • All experiments • All runs

Organism: wastewater metagenome

Library:

Name: VLT_1923-241119.1

Instrument: Illumina NovaSeq 6000

Strategy: AMPLICON

Source: METAGENOMIC

Selection: RT-PCR

Layout: PAIRED

Runs: 1 run, 2.1M spots, 1G bases, 341.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR31636756	2,124,145	1G	341.1Mb	2024-12-06

ID:: 36463699

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